63,337
Downloads
2,248
Downloads of v 14.18.1
6/12/2017
Last update
Jmol molecule viewer
14.18.1
Jmol is a free, open source molecule viewer for students, educators, and researchers in chemistry and biochemistry.
Features
- Free, open-source software licensed under the GNU Lesser General Public License
- Applet, Application, and Systems Integration Component*
- Multi-language
- Cross-platform
- Supports all major web browsers: Internet Explorer, Mozilla and Firefox, Safari, Google Chrome, Opera, Konqueror, IceWeasel, ...
- High-performance 3D rendering with no hardware requirements
- File formats (see also the file formats section within Jmol Wiki):
- MOL MDL / Elsevier / Symyx structure (classic version V2000)
- V3000 MDL / Elsevier / Symyx structure (new version V3000)
- SDF MDL / Elsevier / Symyx structure (multiple models)
- CTFile MDL / Elsevier / Symyx chemical table (generic)
- CIF Crystallographic Information File - standard from the International Union of Crystallography
- mmCIF Macromolecular Crystallographic Information File - standard from the International Union of Crystallography
- CML Chemical Markup Language
- PDB Protein Data Bank - Research Collaboratory for Structural Bioinformatics
- XYZ XYZ format, XMol file - Minnesota Supercomputer Institute
- XYZ+vib XYZ format with added vibrational vector information
- XYZ-FAH XYZ format for [email protected]
- MOL2 Sybyl, Tripos
- Alchemy Tripos
- CSF Fujitsu CAChe chemical structure, now Fujitsu Sygress
- GAMESS General Atomic and Molecular Electronic Structure System output (both US and UK variants) - Gordon Research Group, Iowa State University
- Gaussian Gaussian 94/98/03 output - Gaussian, Inc.
- Cube Gaussian, Inc.
- Ghemical The Ghemical computational chemistry package
- MM1GP Ghemical molecular mechanics file
- HIN HIN / HIV files from HyperChem - Hypercube, Inc.
- Jaguar Schrodinger, LLC
- MOLPRO Molpro output
- MOPAC MOPAC 93/97/2002 output (public domain)
- MGF MOPAC 2007 (v.7.101) graphf output (public domain)
- NWCHEM NWChem output - Pacific Northwest National Laboratory
- odydata Odyssey data - WaveFunction, Inc.
- xodydata Odyssey XML data - WaveFunction, Inc.
- QOUT Q-Chem, Inc.
- SHELX Structural Chemistry Department, University of Göttingen (Germany)
- SMOL Spartan data - Wavefunction, Inc.
- spinput Spartan data - Wavefunction, Inc.
- GRO Gromos87 format from GROMACS
- PQR Modified pdb format including charge and radius
- Amber The Amber package of molecular simulation programs
- JME Java Molecular Editor - Peter Ertl
- CASTEP The CASTEP software package, uses density functional theory
- FHI-aims Full-potential / all-electron electronic structure theory with local orbitals - Fritz-Haber-Institut der Max-Planck-Gesellschaft
- VASP VASP / VAMP / Vienna ab-initio simulation package
- DGrid Miroslav Kohout, Max-Planck Institute
- ADF ADF output - Amsterdam Density Functional
- XSD Accelrys Materials Studio
- AGL ArgusLab
- DFT Wien2k
- AMPAC AMPAC output - Semichem, Inc.
- WebMO WebMO interface to computational chemistry packages
- Molden Electron density / molecular orbitals
- PSI3 Output files from the PSI3 suite of quantum chemical programs
- CRYSTAL Output files from CRYSTAL, a computational tool for solid state chemistry and physics. Theoretical Chemistry Group, Univ. Torino, Italy.
- Files which are compressed with gzip will automatically be decompressed
- Animations
- Vibrations
- Surfaces
- Orbitals
- Support for unit cell and symmetry operations
- Schematic shapes for secondary structures in biomolecules
- Measurements of distance, angle, torsion angle
- Support for RasMol/Chime scripting language
- JavaScript support library (Jmol.js)
- Exports to jpg, png, gif, ppm, pdf, POV-Ray, Gaussian, Maya, vrml, x3d, idtf, web page.
To install Jmol molecule viewer, run the following command from the command line or from PowerShell:
C:\> choco install jmol
--version 14.18.1
To upgrade Jmol molecule viewer, run the following command from the command line or from PowerShell:
C:\> choco upgrade jmol
--version 14.18.1
Files
Hide- tools\Jmol_icon13.ico
- tools\chocolateyUninstall.ps1
Show
$desktop = [Environment]::GetFolderPath("Desktop") $shortcut = Join-Path $desktop 'Jmol.lnk' if ([System.IO.File]::Exists($shortcut)) { Write-Debug "Found the desktop shortcut. Deleting it..." [System.IO.File]::Delete($shortcut) } - tools\chocolateyInstall.ps1
Show
$packageName = 'Jmol' $url = 'https://sourceforge.net/projects/jmol/files/Jmol/Version%2014.18/Jmol%2014.18.1/Jmol-14.18.1-binary.zip' $Checksum = '93a5b12b0e694274a16fc12d7a2f23bbbdec860c1316da0cace56df6a42fb3b2' $installDir = Split-Path (Split-Path -parent $script:MyInvocation.MyCommand.Path) $installArgs = @{ packageName = $packageName url = $url Checksum = $Checksum ChecksumType = 'sha256' UnzipLocation = $installDir } Install-ChocolateyZipPackage @installArgs $JavaExe = "$env:ProgramData\Oracle\Java\javapath\javaw.exe" $target = (Get-ChildItem $installDir -filter jmol.jar -Recurse).fullname $icon = Join-Path $installDir 'tools\Jmol_icon13.ico' $launcher = Join-Path $installDir 'Jmol Launcher.exe' $SGpath = Join-Path $env:ChocolateyInstall 'tools\shimgen.exe' & $SGpath -o $launcher -p $JavaExe -c "-jar '$target'" -i $icon --gui $shortcut = Join-Path ([Environment]::GetFolderPath("Desktop")) 'Jmol.lnk' Install-ChocolateyShortcut -ShortcutFilePath $shortcut -TargetPath $launcher -IconLocation $icon
Virus Scan Results
- Jmol Launcher.exe (7dcf918519ad) - ## / 58 - Log in or click on link to see number of positives
- jmol.14.18.1.nupkg (4acce31d1fb6) - ## / 56 - Log in or click on link to see number of positives
- jsmol.zip (2233fdd4bcb0) - ## / 59 - Log in or click on link to see number of positives
- Jmol-14.18.1-binary.zip (93a5b12b0e69) - ## / 57 - Log in or click on link to see number of positives
Dependencies
-
- jre8 (≥ 8.0)
Package Maintainer(s)
teknowledgist
Software Author(s)
Copyright
Copyright © 1998-2016 The Jmol Development Team
Tags
Release Notes
https://sourceforge.net/projects/jmol/files/Jmol/Version%2014.6/Version%2014.6.1/
Version History
| Version | Downloads | Last updated | Status |
|---|---|---|---|
| Jmol molecule viewer 14.29.42 | 1258 | Thursday, May 16, 2019 | approved |
| Jmol molecule viewer 14.29.40 | 3352 | Tuesday, April 30, 2019 | approved |
| Jmol molecule viewer 14.29.36 | 3610 | Sunday, April 14, 2019 | approved |
| Jmol molecule viewer 14.29.34 | 683 | Thursday, April 11, 2019 | approved |
| Jmol molecule viewer 14.29.31 | 8548 | Tuesday, March 5, 2019 | approved |
| Jmol molecule viewer 14.29.29 | 5684 | Friday, November 30, 2018 | approved |
| Jmol molecule viewer 14.29.28 | 179 | Thursday, November 1, 2018 | approved |
| Jmol molecule viewer 14.29.26 | 144 | Friday, October 12, 2018 | approved |
| Jmol molecule viewer 14.29.22 | 564 | Monday, September 17, 2018 | approved |
| Jmol molecule viewer 14.29.17 | 9090 | Friday, June 22, 2018 | approved |
Discussion for the Jmol molecule viewer Package
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